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Form of Proxy

CODEXIS, INC.

Notes

No. Proposition For Against Abstain
1

DIRECTOR David V. Smith

2

DIRECTOR Dennis P. Wolf

3

To ratify the selection by the Audit Committee of our Board of Directors of KPMG LLP as the Companys independent registered public accounting firm for the fiscal year ending December 31, 2025.

4

To approve, on a non-binding, advisory basis, the compensation of our named executive officers.

5

To approve an amendment to the Codexis, Inc. 2019 Incentive Award Plan to increase the number of shares available for issuance thereunder by 8,000,000 shares.